Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866955.1_cds_XP_016432929.1_29127
CDS Infomation

[gene=LOC107759483] [db_xref=GeneID:107759483] [protein=omega-6 fatty acid desaturase, chloroplastic-like isoform X2] [protein_id=XP_016432929.1] [location=join(15218..15256,15360..15414,16956..17194,17859..18002,18116..18267,18961..19083,19175..19352,19464..19582,20597..20711,21443..21604)] [gbkey=CDS]
Sequence

ATGGCTTGTAGTGTTGCAGACTCTGGTTTCTTATTCTTGGCCTCCAAGAAAAGACCAATT
CATAGCACTAGAATTACCCAAGTTGCTTCTTCAGGAACATATTTTTTAAAGTGGGAAAGT
CTACCTCAGATAAGATCCAAACAAAAAAGCTGCTTAATTTCTTTGAGAAAGACAAATGTT
GTACGAGCTGTTGCAGTTCCGATAGCACCTTCTCCGTTAGACAGTGCAGAGGATAGGAAA
CAGTTAAGTGAAATGTATGGCTTTAGACAAATTGGAGAACCACTACCTCATAAAGTCACA
ATGAAAGATATTACTGAAACTCTCCCAAAGAAGGTATTCGAGATTGACAACGGGAAGGCA
TTGAAGTCAGTTTTGATATCAGTAACTTCATATACTCTCGGGCTTTTCATGATTGCCAAA
GCTCCATGGTATCTACTTCCACTGGCTTGGGCTTGGACAGGAACAGCAGTTACAGGGTTC
TTTGTAATAGGACATGATTGCGCTCACAAATCCTTCTCAAAGAACAAATTCTTGGAAGAT
ATAATTGGAACTCTGGCCTTTTTGCCGTTGATATATCCCTATGAGCCATGGCGGTTCAAG
CATGATCGGCATCACGCAAAAACAAACATGTTGCATGAAGATACAGCTTGGCAGCCTGTT
TGGAAGGAGGAGTTCGATTCGGTCCCTGCTCTGAGGAAGGCAATTATATTTGGTTATGGA
CCCTTTCGACCTTGGATGTCTATAGCTCACTGGTGGCTCTGTCATTTCAATTTGAAGAAG
TTCAGACCAAATGAAATTAACCGGGTGAAAATAAGTTTGGGTTGCGTCTTTGCTTTTATG
GCAATTGGCTGGCCATTGATAATCTGGAAAACAGGGATTATTGGATGGATTAAGTTCTGG
TTAATGCCGTGGTTGGGTTATCATTTTTGGATGAGTACTTTTACAATGGTTCATCATACG
GCACCTCACATACCCTTCAAAAATTCTGATGAGTGGAATGCTGCTCAGGCCCAGCTGAAT
GGCACAGTTCACTGTGATTATCCTAGTTGGATTGAGGTTCTTTGTCATGATATCAATGTT
CATATCCCCCACCACATATCCCCCAGAATACCGAGTTATAATCTACGGGCAGCTCATCAA
TCTCTCCAACAGAATTGGGGAAAGTACCTGAACGAGGCTTCATGGAACTGGCGTCTAATG
AAGACAATACTGACAATATGTCACGTGTACGATAAGGAGCAGAATTACGTTGCCTTTGAC
GAAGTTGTCCCTGAAGAAGCCCAGCCGATTACATTCCTTAAAAAAGTAATGCCTGACTAT
GCTTGA

Peptide Sequence

PEP ID

XP_016432929.1
PEP Infomation

PREDICTED: omega-6 fatty acid desaturase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MACSVADSGFLFLASKKRPIHSTRITQVASSGTYFLKWESLPQIRSKQKSCLISLRKTNV
VRAVAVPIAPSPLDSAEDRKQLSEMYGFRQIGEPLPHKVTMKDITETLPKKVFEIDNGKA
LKSVLISVTSYTLGLFMIAKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKFLED
IIGTLAFLPLIYPYEPWRFKHDRHHAKTNMLHEDTAWQPVWKEEFDSVPALRKAIIFGYG
PFRPWMSIAHWWLCHFNLKKFRPNEINRVKISLGCVFAFMAIGWPLIIWKTGIIGWIKFW
LMPWLGYHFWMSTFTMVHHTAPHIPFKNSDEWNAAQAQLNGTVHCDYPSWIEVLCHDINV
HIPHHISPRIPSYNLRAAHQSLQQNWGKYLNEASWNWRLMKTILTICHVYDKEQNYVAFD
EVVPEEAQPITFLKKVMPDYA

Transcript Sequence

Gene sequence data has not been registered.